I can't run 1 of 6 docker container after system update (cgroup)

[mgazzin]

I have an RBI where I run several containers with docker-compose.
What I have done today is:

#docker system prune
#pacman -Syyu
#reboot

After reboot I have 6 docker containers running but one is not running. I am getting this message after docker-compose up -d --build:

Error response from daemon: failed to create shim: OCI runtime create failed: runc create failed: unable to start container process: unable to apply cgroup configuration: chown /sys/fs/cgroup/system.slice/docker-72b8aa786475a12505bb14602a8453c1eb49148125e0811cd65628aa5bf6b664.scope/memory.oom.group: no such file or directory: unknown

More in details running dockerd --debug I am getting:

DEBU[2022-01-28T11:46:45.686091144+01:00] Calling HEAD /_ping                          
DEBU[2022-01-28T11:46:45.952842537+01:00] Calling HEAD /_ping                          
DEBU[2022-01-28T11:46:45.990377849+01:00] Calling GET /v1.41/containers/json?all=1&filters=%7B%22label%22%3A%7B%22com.docker.compose.project%3Dmarket_console%22%3Atrue%7D%7D&limit=0 
DEBU[2022-01-28T11:46:46.005217136+01:00] Calling GET /v1.41/images/market_console_app/json 
DEBU[2022-01-28T11:46:46.006184564+01:00] Calling GET /v1.41/images/market_console_influxdb/json 
DEBU[2022-01-28T11:46:46.006383264+01:00] Calling GET /v1.41/images/grafana/grafana/json 
DEBU[2022-01-28T11:46:46.015598721+01:00] Calling GET /v1.41/info                      
DEBU[2022-01-28T11:46:46.066461534+01:00] Calling GET /v1.41/networks/market_console_default 
DEBU[2022-01-28T11:46:46.080195118+01:00] Calling GET /v1.41/containers/json?all=1&filters=%7B%22label%22%3A%7B%22com.docker.compose.oneoff%3DFalse%22%3Atrue%2C%22com.docker.compose.project%3Dmarket_console%22%3Atrue%2C%22com.docker.compose.service%3Dinfluxdb%22%3Atrue%7D%7D&limit=0 
DEBU[2022-01-28T11:46:46.080195340+01:00] Calling GET /v1.41/containers/json?all=1&filters=%7B%22label%22%3A%7B%22com.docker.compose.oneoff%3DFalse%22%3Atrue%2C%22com.docker.compose.project%3Dmarket_console%22%3Atrue%2C%22com.docker.compose.service%3Dapp%22%3Atrue%7D%7D&limit=0 
DEBU[2022-01-28T11:46:46.086039501+01:00] Calling GET /v1.41/containers/json?all=1&filters=%7B%22label%22%3A%7B%22com.docker.compose.oneoff%3DFalse%22%3Atrue%2C%22com.docker.compose.project%3Dmarket_console%22%3Atrue%2C%22com.docker.compose.service%3Dgrafana%22%3Atrue%7D%7D&limit=0 
DEBU[2022-01-28T11:46:46.093000921+01:00] Calling POST /v1.41/containers/0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3/start 
DEBU[2022-01-28T11:46:46.098024726+01:00] container mounted via layerStore: &{/var/lib/docker/overlay2/42412201c72d1fd9cbc2818c24022c38b5306e2fdb61d0d3f804d1f9aa4dfcc6/merged 0xaaaac54fbf80 0xaaaac54fbf80}  container=0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3
DEBU[2022-01-28T11:46:46.100128080+01:00] Assigning addresses for endpoint market-console's interface on network market_console_default 
DEBU[2022-01-28T11:46:46.100293910+01:00] RequestAddress(LocalDefault/172.20.0.0/16, <nil>, map[]) 
DEBU[2022-01-28T11:46:46.100485648+01:00] Request address PoolID:172.20.0.0/16 App: ipam/default/data, ID: LocalDefault/172.20.0.0/16, DBIndex: 0x0, Bits: 65536, Unselected: 65531, Sequence: (0xf0000000, 1)->(0x0, 2046)->(0x1, 1)->end Curr:4 Serial:false PrefAddress:<nil>  
DEBU[2022-01-28T11:46:46.136409897+01:00] Assigning addresses for endpoint market-console's interface on network market_console_default 
DEBU[2022-01-28T11:46:46.136833056+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).addSvcRecords(market-console, 172.20.0.4, <nil>, true) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 
DEBU[2022-01-28T11:46:46.137230938+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).addSvcRecords(market-console, 172.20.0.4, <nil>, false) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 
DEBU[2022-01-28T11:46:46.137421880+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).addSvcRecords(app, 172.20.0.4, <nil>, false) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 
DEBU[2022-01-28T11:46:46.137786429+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).addSvcRecords(0613615cff4c, 172.20.0.4, <nil>, false) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 
DEBU[2022-01-28T11:46:46.170207700+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).addSvcRecords(market-console, 172.20.0.4, <nil>, true) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 
DEBU[2022-01-28T11:46:46.170596230+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).addSvcRecords(market-console, 172.20.0.4, <nil>, false) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 
DEBU[2022-01-28T11:46:46.170792060+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).addSvcRecords(app, 172.20.0.4, <nil>, false) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 
DEBU[2022-01-28T11:46:46.170969335+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).addSvcRecords(0613615cff4c, 172.20.0.4, <nil>, false) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 
DEBU[2022-01-28T11:46:46.186922401+01:00] Programming external connectivity on endpoint market-console (a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054) 
DEBU[2022-01-28T11:46:46.198020788+01:00] EnableService 0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3 START 
DEBU[2022-01-28T11:46:46.198172619+01:00] EnableService 0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3 DONE 
DEBU[2022-01-28T11:46:46.217122097+01:00] createSpec: cgroupsPath: system.slice:docker:0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3 
DEBU[2022-01-28T11:46:46.234536749+01:00] bundle dir created                            bundle=/var/run/docker/containerd/0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3 module=libcontainerd namespace=moby root=/var/lib/docker/overlay2/42412201c72d1fd9cbc2818c24022c38b5306e2fdb61d0d3f804d1f9aa4dfcc6/merged
DEBU[2022-01-28T11:46:46.576978076+01:00] event published                               ns=moby topic=/containers/create type=containerd.events.ContainerCreate
time="2022-01-28T11:46:46.644053968+01:00" level=info msg="starting signal loop" namespace=moby path=/run/docker/containerd/daemon/io.containerd.runtime.v2.task/moby/0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3 pid=6127
DEBU[2022-01-28T11:46:46.729791140+01:00] failed to delete task                         error="rpc error: code = NotFound desc = container not created: not found" id=0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3
INFO[2022-01-28T11:46:46.730757661+01:00] shim disconnected                             id=0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3
WARN[2022-01-28T11:46:46.730952325+01:00] cleaning up after shim disconnected           id=0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3 namespace=moby
INFO[2022-01-28T11:46:46.730994361+01:00] cleaning up dead shim                        
WARN[2022-01-28T11:46:46.757367992+01:00] cleanup warnings time="2022-01-28T11:46:46+01:00" level=info msg="starting signal loop" namespace=moby pid=6147 
ERRO[2022-01-28T11:46:46.758590324+01:00] copy shim log                                 error="read /proc/self/fd/37: file already closed"
ERRO[2022-01-28T11:46:46.760136224+01:00] stream copy error: reading from a closed fifo 
ERRO[2022-01-28T11:46:46.761628513+01:00] stream copy error: reading from a closed fifo 
DEBU[2022-01-28T11:46:46.801748062+01:00] event published                               ns=moby topic=/containers/delete type=containerd.events.ContainerDelete
DEBU[2022-01-28T11:46:46.853864484+01:00] Revoking external connectivity on endpoint market-console (a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054) 
DEBU[2022-01-28T11:46:46.869845493+01:00] DeleteConntrackEntries purged ipv4:0, ipv6:0 
DEBU[2022-01-28T11:46:46.947617854+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).deleteSvcRecords(market-console, 172.20.0.4, <nil>, true) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054  
DEBU[2022-01-28T11:46:46.947844869+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).deleteSvcRecords(market-console, 172.20.0.4, <nil>, false) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054  
DEBU[2022-01-28T11:46:46.947947997+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).deleteSvcRecords(app, 172.20.0.4, <nil>, false) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054  
DEBU[2022-01-28T11:46:46.948060643+01:00] a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054 (cc259f7).deleteSvcRecords(0613615cff4c, 172.20.0.4, <nil>, false) updateSvcRecord sid:a72998b7a595243558764ef04f65bed724e39254372131baf6ff93aaf32be054  
DEBU[2022-01-28T11:46:47.008847586+01:00] Releasing addresses for endpoint market-console's interface on network market_console_default 
DEBU[2022-01-28T11:46:47.009008602+01:00] ReleaseAddress(LocalDefault/172.20.0.0/16, 172.20.0.4) 
DEBU[2022-01-28T11:46:47.009147470+01:00] Released address PoolID:LocalDefault/172.20.0.0/16, Address:172.20.0.4 Sequence:App: ipam/default/data, ID: LocalDefault/172.20.0.0/16, DBIndex: 0x0, Bits: 65536, Unselected: 65530, Sequence: (0xf8000000, 1)->(0x0, 2046)->(0x1, 1)->end Curr:5 
ERRO[2022-01-28T11:46:47.513577185+01:00] 0613615cff4c8dd13c1525c8bbda0b9f368734d91bbe207ce386ecd19e2b5fa3 cleanup: failed to delete container from containerd: no such container 
DEBU[2022-01-28T11:46:47.546139678+01:00] garbage collected                             d=8.211326ms

Any good hint?

[andreas85]

How to increase your chances of solving your issue:

[HowTo] Increase your chances of solving your issue

Difficulty: ★☆☆☆☆ Strong of its many members, the Manjaro support forum can provide you help whenever you have an issue with your Manjaro installation. But in order to work efficiently, we shall also ask you to follow three major steps. Keep calm and read First some basics: whenever you need to troubleshoot, chances are the solution is already under your nose. Find error messages Very often when an applications crashes, and sometimes when it misbehaves, it prints an error message somewhere. …

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Welcome to Manjaro! To allow all of us helpful people on this forum TO HELP YOU, we need some basic information about your system. This probably means you described the symptoms of your problem, but now we need some more information to know where the origin of your issue is exactly. Someone else probably linked you to this tutorial, so if you’re reading this in response to a question, please click the link above this text to bring you to the full and unabridged text of the tutorial…

[mgazzin]

Just added:

cgroup_enable=memory cgroup_memory=1

at the end of /boot/cmdline.txt and rebooted.
It now works.
It is more a docker related issue than a manjaro issue.

[Jtyle6]

Not Solved By Editing the title of the post.