Update icon not reset after updating flatpaks

Hi all!

This is clearly minor, but I found a glitch with the tray icon signaling updates: if the updated package is a flatpack, the icon stays red (and shows the need for updates with the right click) even if the package has already been updated.

After log in/log out it the icons go back to the normal white status.

Could it be something of my configuration, or can somebody else confirm it?

BTW, I’m on wayland and GNOME:

> inxi -xxx -S                                                                         ✔ 
System:
  Host: ramoth Kernel: 6.6.47-1-MANJARO arch: x86_64 bits: 64 compiler: gcc
    v: 14.2.1 clocksource: tsc
  Desktop: GNOME v: 46.4 tk: GTK v: 3.24.43 wm: gnome-shell
    tools: gsd-screensaver-proxy dm: GDM v: 46.2 Distro: Manjaro
    base: Arch Linux

Your screenshot is of GNOME Software while the update notifier icon is from Add /Remove Software (aka Pamac). Apparently you have Google Chrome installed from the AUR, not as a Flatpak.

EDIT: Whoops, sorry. I was wrong.

You can verify by checking what’s installed:

flatpak list | grep Chrome
pamac list --installed | grep chrome

Hmmm… I do not think so.

The big window is the one that shows up when I click “Package Manager” in the right click menu.

> flatpak list | grep Chrome                                                           ✔ 
Google Chrome	com.google.Chrome	128.0.6613.119-1	stable	flathub	system
 > pamac list --installed | grep -i chrome                                              ✔ 
 >     

This is the screenshot I get when I right-click on the red shield, then select “Package Manager”, then “About”. It’s not Gnome Software…

And yes, Chrome is installed as flatpak (it’s the only way I know to have then the PWA of Microsoft Teams working correctly); this is a partial screenshot form Pamac:

You’re right. :facepalm:

I edited my reply above accordingly.

Please forgive me. :grimacing:

If you do not already have a Manjaro GitLab account, I can create an upstream Libpamac issue for you. Either way, @guinux (Pamac developer) will need more info. Please see the following for instructions:

Ok, thanks!

Let’s see if @guinux can chime in, otherwise I’ll try to collect debug info when there will be another flatpak update. My wild guess is that it’s just a missing “update_icon_status” somewhere and nothing more, everything is working well otherwise.

Ok, I had an OpenShot video editor flatpak update this morning, and I followed the instructions you posted there. I run the pamac manager with debug as explained here.

There were no errors, and the run went ok, but the log is almost unreadable due to the prompt thingies… Anyway, I have it if needed, in txt.gz format, that seems I can’t upload here.

I tried again in a dumb terminal… and it’s a bit better, but no error again:

bash log of pamac with gdb
Script started on 2024-09-08 18:07:18+02:00 [TERM="xterm" TTY="/dev/pts/4" COLUMNS="142" LINES="41"]
e[1me[7m%e[27me[1me[0m                                                                                                                                             
 
e]2;romano@ramoth:~/tmpae]1;~/tmpae]7;file://ramoth/home/romano/tmpa
e[0me[27me[24me[Je[0me[49me[39me[0me[49me[34me[34m~e[0me[34me[49me[34m/e[34mtmpe[0me[34me[49me[34me[0me[34me[49me[34me[0me[34me[49m e[0me[34me[49me[32m>e[0me[32me[49me[32me[0me[32me[49me[30me[0me[30me[49me[39m e[0me[49me[39me[Ke[133Ce[0me[49me[39me[133De[?2004hgdb -q --args pamac-managere[27De[32mge[32mde[32mbe[39me[24Ce[?2004l

e]2;gdb -q --args pamac-managerae]1;aReading symbols from e[32mpamac-managere[m...
Reading symbols from e[32m/usr/lib/debug/usr/bin/pamac-manager.debuge[m...
e[?2004h(gdb) run
e[?2004l
Starting program: e[32m/usr/bin/pamac-managere[m 

This GDB supports auto-downloading debuginfo from the following URLs:
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To make this setting permanent, add 'set debuginfod enabled on' to .gdbinit.
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e[?2004h(gdb) exit
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e[1me[7m%e[27me[1me[0m                                                                                                                                             
 
e]2;romano@ramoth:~/tmpae]1;~/tmpae]7;file://ramoth/home/romano/tmpa
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e[1me[7m%e[27me[1me[0m                                                                                                                                             
 
e]2;romano@ramoth:~/tmpae]1;~/tmpae]7;file://ramoth/home/romano/tmpa
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e]2;ls --color=autoae]1;aCVcomillas.docx    lalla.pdf          lilla.log          lulla.fls         OLD_PIP_pkgs.txt   whichcompiler.fdb_latexmk  wow.log
e[0me[01;31mildulin.ps.gze[0m      e[01;31mlalla.synctex.gze[0m   lilla.pdf          lulla.log         pacman-2.txt       whichcompiler.fls          wow.pdf
lalla.aux          lalla.tex          e[01;31mlilla.synctex.gze[0m   lulla.pdf         e[01;31mpamac.txt.gze[0m       whichcompiler.log          wow.tex
lalla.fdb_latexmk  lilla.aux          lilla.tex          e[01;31mlulla.synctex.gze[0m  test2.csv          whichcompiler.pdf
lalla.fls          lilla.fdb_latexmk  lulla.aux          lulla.tex         test.csv           e[01;31mwhichcompiler.synctex.gze[0m
lalla.log          lilla.fls          lulla.fdb_latexmk  OLD_AUR_pkgs.txt  whichcompiler.aux  wow.aux
e[1me[7m%e[27me[1me[0m                                                                                                                                             
 
e]2;romano@ramoth:~/tmpae]1;~/tmpae]7;file://ramoth/home/romano/tmpa
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e[Je[7mpacman-2.txte[0m  e[Je[01;31mpamac.txt.gze[0me[Je[Ae[0me[27me[24me[0me[39me[49m
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e[Je[Ae[25Ce[1m e[0me[0m e[?2004l

e[Je]2;less pacman-2.txtae]1;ae[?1he=
Script started on 2024-09-08 18:07:18+02:00 [TERM="xterm" TTY="/dev/pts/4" COLUMNS="142" LINES="41"]e[m
e[1me[7m%e[27me[1me[0m                                                                                                                                             e[m e[1me[7me[27me[1me[0me[01;47;34m^Me[0m e[01;47;34m^Me[0momano@ramoth:~/tmpe[01;47;34m^Ge[0m/tmpe[01;47;34m^Ge[0mile://ramoth/home/romano/tmpe[01;47;34m^G^Me[0me[0me[27me[24me[0me[49me[39me[0me[49me[34me[34m~e[0me[34me[49me[34m/e[34mtmpe[0me[34me[49me[34me[0me[34me[49me[34me[0me[34me[49m e[0me[34me[49me[32m>e[0me[32me[49me[32me[0me[32me[49me[30me[0me[30me[49me[39m e[0me[49me[39me[0me[49me[39mgdb -q --args pamac-managere[32mge[32mde[32mbe[39me[m
db -q --args pamac-managere[01;47;34m^Ge[0mReading symbols from e[32mpamac-managere[m...e[m
Reading symbols from e[32m/usr/lib/debug/usr/bin/pamac-manager.debuge[m...e[m
(gdb) rune[m
e[01;47;34m^Me[0mStarting program: e[32m/usr/bin/pamac-managere[m e[m
e[m
This GDB supports auto-downloading debuginfo from the following URLs:e[m
  <e[32mhttps://debuginfod.archlinux.orge[m>e[m
Enable debuginfod for this session? (y or [n]) ye[m
e[01;47;34m^Me[0mDebuginfod has been enabled.e[m
To make this setting permanent, add 'set debuginfod enabled on' to .gdbinit.e[m
Downloading separate debug info for e[32msystem-supplied DSO at 0x7ffff7fc5000e[me[m
e[01;47;34m^Me[0m[###                                                                                                                                       ]e[m e[01;47;34m^Me[0m                                                                                                                                            e[m   e[01;47;34m^Me[0mDownloading separate debug info for e[32m/usr/lib/libgio-2.0.so.0e[me[m
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e[01;47;34m^Me[0m[###                                                                                                                                       ]e[m e[01;47;34m^Me[0m                                                                                                                                            e[m   e[01;47;34m^Me[0m[Thread debugging using libthread_db enabled]e[m
Using host libthread_db library "e[32m/usr/lib/libthread_db.so.1e[m".e[m
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e[01;47;34m^Me[0m[###                

Again, the icon is still red and it still indicates the need of an update,

but the update seems done:

flatpak list | grep -i openshot                                              1|1 ✘ 
OpenShot Video Editor	org.openshot.OpenShot	3.2.1	stable	flathub	system

Although issuing sudo flatpak update by hand gives another story:

sudo flatpak update summary
 sudo flatpak update                                                         1 ✘  3s  
Looking for updates…

Info: runtime org.kde.Platform branch 6.4 is end-of-life, with reason:
   We strongly recommend moving to the latest stable version of the Plaform and SDK

Info: runtime org.kde.Platform branch 5.15-21.08 is end-of-life, with reason:
   We strongly recommend moving to the latest stable version of the Platform and SDK

Info: runtime org.kde.Platform branch 5.15 is end-of-life, with reason:
   We strongly recommend moving to the latest stable version of the Plaform and SDK
Info: applications using this runtime:
   org.adi.Scopy

Info: runtime org.gnome.Platform branch 44 is end-of-life, with reason:
   The GNOME 44 runtime is no longer supported as of March 20, 2024. Please ask your application developer to migrate to a supported platform.

Info: runtime org.gnome.Platform branch 43 is end-of-life, with reason:
   The GNOME 43 runtime is no longer supported as of September 20, 2023. Please ask your application developer to migrate to a supported platform.

Info: runtime org.gnome.Platform branch 42 is end-of-life, with reason:
   The GNOME 42 runtime is no longer supported as of March 21, 2023. Please ask your application developer to migrate to a supported platform.

Info: runtime org.freedesktop.Platform.GL.default branch 21.08 is end-of-life, with reason:
   org.freedesktop.Platform 21.08 is no longer receiving fixes and security updates. Please update to a supported runtime version.

Info: runtime org.freedesktop.Platform.GL.default branch 20.08 is end-of-life, with reason:
   org.freedesktop.Platform 20.08 is no longer receiving fixes and security updates. Please update to a supported runtime version.
Info: applications using this extension:
   org.adi.Scopy


        ID                                                  Branch     Op Remote  Download
 1.     org.kde.PlatformTheme.QGnomePlatform                5.15-21.08 i  flathub  < 10.6 MB
 2.     org.kde.PlatformTheme.QGnomePlatform                5.15-23.08 i  flathub  < 10.6 MB
 3.     org.kde.PlatformTheme.QGnomePlatform                6.4        i  flathub   < 9.6 MB
 4.     org.kde.PlatformTheme.QGnomePlatform                6.6        i  flathub   < 9.7 MB
 5.     org.kde.PlatformTheme.QtSNI                         5.15-21.08 i  flathub   < 1.3 MB
 6.     org.kde.WaylandDecoration.QAdwaitaDecorations       5.15-23.08 i  flathub < 956.6 kB
 7.     org.kde.WaylandDecoration.QAdwaitaDecorations       6.6        i  flathub   < 1.2 MB
 8.     org.kde.WaylandDecoration.QAdwaitaDecorations       6.7        i  flathub   < 1.2 MB
 9.     org.kde.WaylandDecoration.QGnomePlatform-decoration 5.15-21.08 i  flathub  < 11.1 MB
10.     org.kde.WaylandDecoration.QGnomePlatform-decoration 5.15-23.08 i  flathub  < 11.1 MB
11.     org.kde.WaylandDecoration.QGnomePlatform-decoration 6.4        i  flathub  < 10.2 MB
12.     org.freedesktop.Platform.GL.default                 21.08      r
13.     org.gnome.Platform.Locale                           42         r
14.     org.gnome.Platform.Locale                           43         r
15.     org.gnome.Platform.Locale                           44         r
16.     org.gnome.Platform                                  42         r
17.     org.gnome.Platform                                  43         r
18.     org.gnome.Platform                                  44         r
19.     org.kde.Platform.Locale                             5.15-21.08 r
20.     org.kde.Platform.Locale                             6.4        r
21.     org.kde.Platform                                    5.15-21.08 r
22.     org.kde.Platform                                    6.4        r

Proceed with these changes to the system installation? [Y/n]:

answering yes it works, but the red icons keeps saying that I have to update openshot

I have noticed the same issue when updating Flatpaks, I just close the update Applet in the System Tray, it reloads next time there is any update.

Hmm, that is not possible in Gnome — there is no option in the right-click menu to close the applet/indicator.

To me the update notifications is an annoyance so I disable it completely.

I check for updates when syncing will not interfere with the work I am doing.

Open pamac → Preferences → set update notification to weekly - then disable - and save.

I also only use one mirror in my mirror pool to ensure consistency.

2 Likes

BTW, I found the Gnome Extension on github and reported there: